Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
Pcdh20Q8BIZ0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Gm22697-201ENSMUST00000175194 63 ntBASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh20Q8BIZ0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Gm6659-201ENSMUST00000174752 547 ntBASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh20Q8BIZ0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Gm18958-201ENSMUST00000174258 762 ntBASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Mir1668-201ENSMUST00000184114 107 ntBASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdh20Q8BIZ0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.86■□□□□ 0.13
Pcdh20Q8BIZ0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms