Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.48■□□□□ 0.07
Vrk1Q80X41 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Gm1401-201ENSMUST00000122048 772 ntBASIC15.48■□□□□ 0.07
Vrk1Q80X41 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.48■□□□□ 0.07
Vrk1Q80X41 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.48■□□□□ 0.07
Vrk1Q80X41 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Vrk1Q80X41 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.47■□□□□ 0.07
Vrk1Q80X41 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.47■□□□□ 0.07
Vrk1Q80X41 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.46■□□□□ 0.07
Vrk1Q80X41 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Vrk1Q80X41 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vrk1Q80X41 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vrk1Q80X41 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vrk1Q80X41 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vrk1Q80X41 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vrk1Q80X41 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Vrk1Q80X41 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Vrk1Q80X41 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms