Protein–RNA interactions for Protein: Q80WQ9

Zbed4, Zinc finger BED domain-containing protein 4, mousemouse

Predictions only

Length 1,168 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zbed4Q80WQ9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Zbed4Q80WQ9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Zbed4Q80WQ9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.05■□□□□ 0.48
Zbed4Q80WQ9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Gm10060-201ENSMUST00000212002 111 ntBASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zbed4Q80WQ9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zbed4Q80WQ9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zbed4Q80WQ9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zbed4Q80WQ9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zbed4Q80WQ9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms