Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Otop1Q80VM9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Otop1Q80VM9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Otop1Q80VM9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm7230-201ENSMUST00000173026 815 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Gm15590-201ENSMUST00000078419 552 ntBASIC15.58■□□□□ 0.08
Otop1Q80VM9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Otop1Q80VM9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.57■□□□□ 0.08
Otop1Q80VM9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Gm10355-201ENSMUST00000097146 517 ntBASIC15.57■□□□□ 0.08
Otop1Q80VM9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Otop1Q80VM9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm23935-201ENSMUST00000102303 57 ntBASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm24270-201ENSMUST00000102326 57 ntBASIC15.56■□□□□ 0.08
Otop1Q80VM9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm24245-201ENSMUST00000157318 57 ntBASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Otop1Q80VM9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Otop1Q80VM9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Otop1Q80VM9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Otop1Q80VM9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Otop1Q80VM9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Otop1Q80VM9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.55■□□□□ 0.08
Otop1Q80VM9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Otop1Q80VM9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms