Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snx13Q6PHS6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Snx13Q6PHS6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Snx13Q6PHS6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Snx13Q6PHS6 Actl10-202ENSMUST00000226583 1501 ntBASIC18.39■□□□□ 0.54
Snx13Q6PHS6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Gm10698-201ENSMUST00000182663 604 ntBASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Trmt13-210ENSMUST00000198454 880 ntBASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Gm7791-201ENSMUST00000219066 539 ntBASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snx13Q6PHS6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Asic1-205ENSMUST00000228185 1818 ntBASIC18.38■□□□□ 0.53
Snx13Q6PHS6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snx13Q6PHS6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snx13Q6PHS6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx13Q6PHS6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx13Q6PHS6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms