Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcd3Q6P9Z1 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcd3Q6P9Z1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Gm10812-201ENSMUST00000099864 546 ntBASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcd3Q6P9Z1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Gm27463-201ENSMUST00000183569 57 ntBASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.91□□□□□ -0.02
Smarcd3Q6P9Z1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smarcd3Q6P9Z1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcd3Q6P9Z1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms