Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hmgb4Q6P8W9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hmgb4Q6P8W9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.97■□□□□ 0.31
Hmgb4Q6P8W9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hmgb4Q6P8W9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgb4Q6P8W9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgb4Q6P8W9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.96■□□□□ 0.3
Hmgb4Q6P8W9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hmgb4Q6P8W9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hmgb4Q6P8W9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms