Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube1Q6NZL8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scube1Q6NZL8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube1Q6NZL8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube1Q6NZL8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scube1Q6NZL8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scube1Q6NZL8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gm10698-201ENSMUST00000182663 604 ntBASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scube1Q6NZL8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scube1Q6NZL8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.65■□□□□ 0.1
Scube1Q6NZL8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms