Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.03■□□□□ 0.32
Scube3Q66PY1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.03■□□□□ 0.32
Scube3Q66PY1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.03■□□□□ 0.32
Scube3Q66PY1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scube3Q66PY1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scube3Q66PY1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Scube3Q66PY1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scube3Q66PY1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scube3Q66PY1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.01■□□□□ 0.31
Scube3Q66PY1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scube3Q66PY1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Scube3Q66PY1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Scube3Q66PY1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17■□□□□ 0.31
Scube3Q66PY1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17■□□□□ 0.31
Scube3Q66PY1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17■□□□□ 0.31
Scube3Q66PY1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scube3Q66PY1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scube3Q66PY1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms