Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.5■□□□□ 0.55
Foxn1Q61575 Gm17968-201ENSMUST00000194902 784 ntBASIC18.5■□□□□ 0.55
Foxn1Q61575 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.5■□□□□ 0.55
Foxn1Q61575 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Foxn1Q61575 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.5■□□□□ 0.55
Foxn1Q61575 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Foxn1Q61575 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.49■□□□□ 0.55
Foxn1Q61575 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Foxn1Q61575 Gm4899-201ENSMUST00000178708 719 ntBASIC18.49■□□□□ 0.55
Foxn1Q61575 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.49■□□□□ 0.55
Foxn1Q61575 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.49■□□□□ 0.55
Foxn1Q61575 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Foxn1Q61575 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Gm12428-201ENSMUST00000119844 727 ntBASIC18.48■□□□□ 0.55
Foxn1Q61575 Gm13365-201ENSMUST00000121188 973 ntBASIC18.48■□□□□ 0.55
Foxn1Q61575 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Gm25948-201ENSMUST00000175334 112 ntBASIC18.48■□□□□ 0.55
Foxn1Q61575 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.48■□□□□ 0.55
Foxn1Q61575 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Foxn1Q61575 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Foxn1Q61575 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.47■□□□□ 0.55
Foxn1Q61575 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Mir6977-201ENSMUST00000184960 64 ntBASIC18.47■□□□□ 0.55
Foxn1Q61575 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.47■□□□□ 0.55
Foxn1Q61575 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.47■□□□□ 0.55
Foxn1Q61575 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.47■□□□□ 0.55
Foxn1Q61575 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.47■□□□□ 0.55
Foxn1Q61575 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Foxn1Q61575 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.46■□□□□ 0.55
Foxn1Q61575 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.46■□□□□ 0.55
Foxn1Q61575 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.46■□□□□ 0.55
Foxn1Q61575 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.46■□□□□ 0.55
Foxn1Q61575 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
Foxn1Q61575 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Foxn1Q61575 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Foxn1Q61575 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Foxn1Q61575 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.46■□□□□ 0.55
Foxn1Q61575 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.46■□□□□ 0.54
Foxn1Q61575 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Foxn1Q61575 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Foxn1Q61575 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxn1Q61575 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxn1Q61575 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxn1Q61575 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Foxn1Q61575 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxn1Q61575 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Foxn1Q61575 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Foxn1Q61575 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms