Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sox17Q61473 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.3■□□□□ 0.04
Sox17Q61473 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox17Q61473 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox17Q61473 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sox17Q61473 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox17Q61473 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sox17Q61473 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox17Q61473 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Gm9731-201ENSMUST00000209480 747 ntBASIC15.29■□□□□ 0.04
Sox17Q61473 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox17Q61473 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox17Q61473 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox17Q61473 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sox17Q61473 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Gm12933-201ENSMUST00000120203 872 ntBASIC15.28■□□□□ 0.04
Sox17Q61473 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox17Q61473 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox17Q61473 Gm37179-201ENSMUST00000194862 823 ntBASIC15.28■□□□□ 0.04
Sox17Q61473 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.28■□□□□ 0.04
Sox17Q61473 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sox17Q61473 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sox17Q61473 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
Sox17Q61473 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.28■□□□□ 0.04
Sox17Q61473 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox17Q61473 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.28■□□□□ 0.04
Sox17Q61473 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.27■□□□□ 0.04
Sox17Q61473 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sox17Q61473 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sox17Q61473 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.27■□□□□ 0.04
Sox17Q61473 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sox17Q61473 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox17Q61473 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sox17Q61473 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox17Q61473 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sox17Q61473 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox17Q61473 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox17Q61473 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sox17Q61473 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox17Q61473 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms