Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.9■□□□□ 0.3
Smarcd1Q61466 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd1Q61466 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcd1Q61466 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Smarcd1Q61466 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcd1Q61466 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Gm27459-201ENSMUST00000184860 107 ntBASIC16.89■□□□□ 0.29
Smarcd1Q61466 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Gm43347-201ENSMUST00000200226 580 ntBASIC16.89■□□□□ 0.29
Smarcd1Q61466 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.89■□□□□ 0.29
Smarcd1Q61466 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.89■□□□□ 0.29
Smarcd1Q61466 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd1Q61466 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd1Q61466 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarcd1Q61466 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.87■□□□□ 0.29
Smarcd1Q61466 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.87■□□□□ 0.29
Smarcd1Q61466 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smarcd1Q61466 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd1Q61466 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms