Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Six4Q61321 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six4Q61321 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six4Q61321 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.39■□□□□ 0.21
Six4Q61321 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.39■□□□□ 0.21
Six4Q61321 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Six4Q61321 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.39■□□□□ 0.21
Six4Q61321 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Six4Q61321 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six4Q61321 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.38■□□□□ 0.21
Six4Q61321 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.38■□□□□ 0.21
Six4Q61321 Ank2-226ENSMUST00000189368 339 ntBASIC16.38■□□□□ 0.21
Six4Q61321 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Six4Q61321 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Six4Q61321 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six4Q61321 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Six4Q61321 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Six4Q61321 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.37■□□□□ 0.21
Six4Q61321 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.37■□□□□ 0.21
Six4Q61321 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Gm27357-201ENSMUST00000183754 135 ntBASIC16.37■□□□□ 0.21
Six4Q61321 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Six4Q61321 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six4Q61321 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.36■□□□□ 0.21
Six4Q61321 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.36■□□□□ 0.21
Six4Q61321 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Six4Q61321 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Six4Q61321 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.36■□□□□ 0.21
Six4Q61321 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Six4Q61321 Gm13312-201ENSMUST00000119631 718 ntBASIC16.36■□□□□ 0.21
Six4Q61321 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.36■□□□□ 0.21
Six4Q61321 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.36■□□□□ 0.21
Six4Q61321 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Mir3081-201ENSMUST00000175305 84 ntBASIC16.36■□□□□ 0.21
Six4Q61321 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Six4Q61321 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Six4Q61321 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six4Q61321 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six4Q61321 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.35■□□□□ 0.21
Six4Q61321 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms