Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-1Q5R1I8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.04□□□□□ -0.64
Trav3-1Q5R1I8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-1Q5R1I8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-1Q5R1I8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-1Q5R1I8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-1Q5R1I8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Gm9939-201ENSMUST00000067161 1154 ntBASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-1Q5R1I8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-1Q5R1I8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-1Q5R1I8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-1Q5R1I8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-1Q5R1I8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav3-1Q5R1I8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-1Q5R1I8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Gm12134-201ENSMUST00000122109 520 ntBASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-1Q5R1I8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-1Q5R1I8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms