Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Gm43183-201ENSMUST00000200632 547 ntBASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Sybu-209ENSMUST00000228639 4113 ntBASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav8d-1Q5R1H8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8d-1Q5R1H8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8d-1Q5R1H8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8d-1Q5R1H8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8d-1Q5R1H8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Trav8d-1Q5R1H8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Mir1199-201ENSMUST00000117015 119 ntBASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8d-1Q5R1H8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms