Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-3Q5R1E6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-3Q5R1E6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-3Q5R1E6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-3Q5R1E6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 271.9 ms