Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm27405-201ENSMUST00000184201 112 ntBASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Prob1-201ENSMUST00000097619 3021 ntBASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm12933-201ENSMUST00000120203 872 ntBASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms