Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Srrm1Q52KI8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Gm12497-201ENSMUST00000138778 237 ntBASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Mir3113-201ENSMUST00000175478 76 ntBASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Gm8655-201ENSMUST00000221159 852 ntBASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Srrm1Q52KI8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Srrm1Q52KI8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.14■□□□□ 0.5
Srrm1Q52KI8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Srrm1Q52KI8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Srrm1Q52KI8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.14■□□□□ 0.49
Srrm1Q52KI8 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
Srrm1Q52KI8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Gm7222-201ENSMUST00000117512 906 ntBASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Chchd1-203ENSMUST00000224633 557 ntBASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Srrm1Q52KI8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.12■□□□□ 0.49
Srrm1Q52KI8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm1Q52KI8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm1Q52KI8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Srrm1Q52KI8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Srrm1Q52KI8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms