Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.62□□□□□ -0.87
Herc2Q4U2R1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm15236-201ENSMUST00000117309 379 ntBASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm12176-201ENSMUST00000121420 875 ntBASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm38160-201ENSMUST00000193090 2499 ntBASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm42693-201ENSMUST00000196779 631 ntBASIC9.61□□□□□ -0.87
Herc2Q4U2R1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Herc2Q4U2R1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.6□□□□□ -0.87
Herc2Q4U2R1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gm8410-201ENSMUST00000117225 605 ntBASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Herc2Q4U2R1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gm16198-201ENSMUST00000118766 670 ntBASIC9.59□□□□□ -0.87
Herc2Q4U2R1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gm18018-201ENSMUST00000198273 408 ntBASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 AC117588.1-201ENSMUST00000228510 999 ntBASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms