Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.42■□□□□ 0.54
GabpaQ00422 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.42■□□□□ 0.54
GabpaQ00422 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
GabpaQ00422 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.42■□□□□ 0.54
GabpaQ00422 Mir6404-201ENSMUST00000183699 94 ntBASIC18.42■□□□□ 0.54
GabpaQ00422 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.42■□□□□ 0.54
GabpaQ00422 Gm18206-201ENSMUST00000207027 926 ntBASIC18.42■□□□□ 0.54
GabpaQ00422 Gm9172-201ENSMUST00000212092 954 ntBASIC18.42■□□□□ 0.54
GabpaQ00422 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
GabpaQ00422 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.42■□□□□ 0.54
GabpaQ00422 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GabpaQ00422 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GabpaQ00422 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.42■□□□□ 0.54
GabpaQ00422 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
GabpaQ00422 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Gm11780-201ENSMUST00000136880 516 ntBASIC18.41■□□□□ 0.54
GabpaQ00422 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GabpaQ00422 Gm7230-201ENSMUST00000173026 815 ntBASIC18.41■□□□□ 0.54
GabpaQ00422 Mir5126-201ENSMUST00000175513 77 ntBASIC18.41■□□□□ 0.54
GabpaQ00422 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.41■□□□□ 0.54
GabpaQ00422 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.41■□□□□ 0.54
GabpaQ00422 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.41■□□□□ 0.54
GabpaQ00422 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.41■□□□□ 0.54
GabpaQ00422 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
GabpaQ00422 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GabpaQ00422 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Gm8097-201ENSMUST00000117903 829 ntBASIC18.4■□□□□ 0.54
GabpaQ00422 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.4■□□□□ 0.54
GabpaQ00422 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.4■□□□□ 0.54
GabpaQ00422 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.4■□□□□ 0.54
GabpaQ00422 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GabpaQ00422 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
GabpaQ00422 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
GabpaQ00422 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
GabpaQ00422 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.39■□□□□ 0.53
GabpaQ00422 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.39■□□□□ 0.53
GabpaQ00422 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.39■□□□□ 0.53
GabpaQ00422 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GabpaQ00422 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GabpaQ00422 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.38■□□□□ 0.53
GabpaQ00422 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.38■□□□□ 0.53
GabpaQ00422 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.38■□□□□ 0.53
GabpaQ00422 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.38■□□□□ 0.53
GabpaQ00422 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
GabpaQ00422 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.38■□□□□ 0.53
GabpaQ00422 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GabpaQ00422 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GabpaQ00422 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
GabpaQ00422 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GabpaQ00422 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GabpaQ00422 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GabpaQ00422 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.37■□□□□ 0.53
GabpaQ00422 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GabpaQ00422 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GabpaQ00422 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GabpaQ00422 Gm6089-201ENSMUST00000197666 938 ntBASIC18.37■□□□□ 0.53
GabpaQ00422 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms