Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
H3f3aP84244 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
H3f3aP84244 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3f3aP84244 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.46□□□□□ -0.09
H3f3aP84244 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
H3f3aP84244 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
H3f3aP84244 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
H3f3aP84244 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3f3aP84244 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.45□□□□□ -0.1
H3f3aP84244 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3aP84244 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3aP84244 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.45□□□□□ -0.1
H3f3aP84244 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.45□□□□□ -0.1
H3f3aP84244 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.45□□□□□ -0.1
H3f3aP84244 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.45□□□□□ -0.1
H3f3aP84244 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3aP84244 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3f3aP84244 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.45□□□□□ -0.1
H3f3aP84244 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
H3f3aP84244 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3f3aP84244 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.44□□□□□ -0.1
H3f3aP84244 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.44□□□□□ -0.1
H3f3aP84244 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H3f3aP84244 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Olfr129-201ENSMUST00000122318 993 ntBASIC14.44□□□□□ -0.1
H3f3aP84244 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.44□□□□□ -0.1
H3f3aP84244 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
H3f3aP84244 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H3f3aP84244 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3f3aP84244 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H3f3aP84244 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3f3aP84244 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.44□□□□□ -0.1
H3f3aP84244 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.43□□□□□ -0.1
H3f3aP84244 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Gm7284-201ENSMUST00000131667 944 ntBASIC14.43□□□□□ -0.1
H3f3aP84244 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.43□□□□□ -0.1
H3f3aP84244 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H3f3aP84244 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms