Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.01□□□□□ -0.17
Ufd1P70362 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.01□□□□□ -0.17
Ufd1P70362 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.01□□□□□ -0.17
Ufd1P70362 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.01□□□□□ -0.17
Ufd1P70362 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ufd1P70362 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.01□□□□□ -0.17
Ufd1P70362 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ufd1P70362 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Ufd1P70362 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14□□□□□ -0.17
Ufd1P70362 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14□□□□□ -0.17
Ufd1P70362 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14□□□□□ -0.17
Ufd1P70362 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ufd1P70362 Mtag2-201ENSMUST00000058665 714 ntBASIC14□□□□□ -0.17
Ufd1P70362 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14□□□□□ -0.17
Ufd1P70362 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ufd1P70362 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ufd1P70362 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ufd1P70362 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ufd1P70362 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.99□□□□□ -0.17
Ufd1P70362 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ufd1P70362 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ufd1P70362 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ufd1P70362 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.99□□□□□ -0.17
Ufd1P70362 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ufd1P70362 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.99□□□□□ -0.17
Ufd1P70362 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ufd1P70362 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.98□□□□□ -0.17
Ufd1P70362 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.98□□□□□ -0.17
Ufd1P70362 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Ufd1P70362 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.98□□□□□ -0.17
Ufd1P70362 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.98□□□□□ -0.17
Ufd1P70362 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.98□□□□□ -0.17
Ufd1P70362 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.98□□□□□ -0.17
Ufd1P70362 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Gm10493-201ENSMUST00000097270 612 ntBASIC13.98□□□□□ -0.17
Ufd1P70362 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms