Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h3aP68433 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hist1h3aP68433 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h3aP68433 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h3aP68433 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Gm9013-201ENSMUST00000132939 882 ntBASIC14.17□□□□□ -0.14
Hist1h3aP68433 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hist1h3aP68433 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hist1h3aP68433 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.15□□□□□ -0.14
Hist1h3aP68433 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.15□□□□□ -0.14
Hist1h3aP68433 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hist1h3aP68433 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hist1h3aP68433 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Mir770-201ENSMUST00000103252 94 ntBASIC14.14□□□□□ -0.15
Hist1h3aP68433 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Gm5587-201ENSMUST00000206270 674 ntBASIC14.14□□□□□ -0.15
Hist1h3aP68433 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hist1h3aP68433 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms