Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm12896-201ENSMUST00000118430 226 ntBASIC11.64□□□□□ -0.55
Rpl39P62892 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rpl39P62892 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.64□□□□□ -0.55
Rpl39P62892 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rpl39P62892 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rpl39P62892 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Rpl39P62892 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.63□□□□□ -0.55
Rpl39P62892 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Gm13158-201ENSMUST00000122007 736 ntBASIC11.63□□□□□ -0.55
Rpl39P62892 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Gm37025-201ENSMUST00000195159 829 ntBASIC11.63□□□□□ -0.55
Rpl39P62892 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rpl39P62892 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Rpl39P62892 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.63□□□□□ -0.55
Rpl39P62892 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rpl39P62892 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.63□□□□□ -0.55
Rpl39P62892 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.63□□□□□ -0.55
Rpl39P62892 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rpl39P62892 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Rpl39P62892 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.62□□□□□ -0.55
Rpl39P62892 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Rpl39P62892 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.62□□□□□ -0.55
Rpl39P62892 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.62□□□□□ -0.55
Rpl39P62892 Gm37292-201ENSMUST00000192062 758 ntBASIC11.62□□□□□ -0.55
Rpl39P62892 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.62□□□□□ -0.55
Rpl39P62892 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rpl39P62892 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Rpl39P62892 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rpl39P62892 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpl39P62892 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rpl39P62892 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.61□□□□□ -0.55
Rpl39P62892 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpl39P62892 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpl39P62892 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.61□□□□□ -0.55
Rpl39P62892 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rpl39P62892 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms