Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.55■□□□□ 0.56
Mmp20P57748 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.55■□□□□ 0.56
Mmp20P57748 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.55■□□□□ 0.56
Mmp20P57748 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.55■□□□□ 0.56
Mmp20P57748 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Mir8117-201ENSMUST00000184773 107 ntBASIC18.55■□□□□ 0.56
Mmp20P57748 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.55■□□□□ 0.56
Mmp20P57748 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.55■□□□□ 0.56
Mmp20P57748 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.55■□□□□ 0.56
Mmp20P57748 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Mmp20P57748 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
Mmp20P57748 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.55■□□□□ 0.56
Mmp20P57748 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp20P57748 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.54■□□□□ 0.56
Mmp20P57748 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mmp20P57748 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.54■□□□□ 0.56
Mmp20P57748 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.54■□□□□ 0.56
Mmp20P57748 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Mmp20P57748 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp20P57748 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.53■□□□□ 0.56
Mmp20P57748 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Mmp20P57748 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.53■□□□□ 0.56
Mmp20P57748 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Mmp20P57748 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.53■□□□□ 0.56
Mmp20P57748 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Mmp20P57748 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Mmp20P57748 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp20P57748 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp20P57748 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Mmp20P57748 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.52■□□□□ 0.56
Mmp20P57748 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.52■□□□□ 0.56
Mmp20P57748 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp20P57748 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.52■□□□□ 0.56
Mmp20P57748 Gm26308-201ENSMUST00000157768 69 ntBASIC18.52■□□□□ 0.56
Mmp20P57748 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.52■□□□□ 0.56
Mmp20P57748 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp20P57748 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp20P57748 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Mmp20P57748 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Mmp20P57748 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp20P57748 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp20P57748 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp20P57748 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp20P57748 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Mmp20P57748 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mmp20P57748 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.51■□□□□ 0.55
Mmp20P57748 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Mmp20P57748 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.51■□□□□ 0.55
Mmp20P57748 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.51■□□□□ 0.55
Mmp20P57748 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Mmp20P57748 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.51■□□□□ 0.55
Mmp20P57748 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp20P57748 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms