Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
Sssca1P56873 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.17□□□□□ -0.3
Sssca1P56873 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.17□□□□□ -0.3
Sssca1P56873 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sssca1P56873 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sssca1P56873 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.17□□□□□ -0.3
Sssca1P56873 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.17□□□□□ -0.3
Sssca1P56873 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sssca1P56873 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sssca1P56873 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.16□□□□□ -0.3
Sssca1P56873 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sssca1P56873 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Sssca1P56873 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.16□□□□□ -0.3
Sssca1P56873 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sssca1P56873 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.16□□□□□ -0.3
Sssca1P56873 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.16□□□□□ -0.3
Sssca1P56873 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sssca1P56873 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sssca1P56873 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sssca1P56873 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.15□□□□□ -0.3
Sssca1P56873 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sssca1P56873 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.15□□□□□ -0.3
Sssca1P56873 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.15□□□□□ -0.3
Sssca1P56873 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Sssca1P56873 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sssca1P56873 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.15□□□□□ -0.3
Sssca1P56873 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sssca1P56873 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sssca1P56873 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.15□□□□□ -0.3
Sssca1P56873 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sssca1P56873 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sssca1P56873 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sssca1P56873 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Gm10698-201ENSMUST00000182663 604 ntBASIC13.14□□□□□ -0.31
Sssca1P56873 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.14□□□□□ -0.31
Sssca1P56873 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.14□□□□□ -0.31
Sssca1P56873 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.14□□□□□ -0.31
Sssca1P56873 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.14□□□□□ -0.31
Sssca1P56873 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sssca1P56873 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms