Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.84□□□□□ -0.03
Cdh11P55288 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.84□□□□□ -0.03
Cdh11P55288 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdh11P55288 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Gm10013-201ENSMUST00000106074 672 ntBASIC14.84□□□□□ -0.03
Cdh11P55288 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdh11P55288 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh11P55288 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cdh11P55288 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Cdh11P55288 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh11P55288 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdh11P55288 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdh11P55288 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh11P55288 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh11P55288 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh11P55288 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh11P55288 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdh11P55288 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cdh11P55288 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdh11P55288 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdh11P55288 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdh11P55288 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdh11P55288 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.83□□□□□ -0.04
Cdh11P55288 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdh11P55288 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cdh11P55288 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh11P55288 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdh11P55288 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdh11P55288 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdh11P55288 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cdh11P55288 Gm7791-201ENSMUST00000219066 539 ntBASIC14.82□□□□□ -0.04
Cdh11P55288 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdh11P55288 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cdh11P55288 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh11P55288 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cdh11P55288 Gm6659-201ENSMUST00000174752 547 ntBASIC14.81□□□□□ -0.04
Cdh11P55288 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Gm18101-201ENSMUST00000215769 548 ntBASIC14.81□□□□□ -0.04
Cdh11P55288 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms