Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl5P50228 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl5P50228 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cxcl5P50228 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cxcl5P50228 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.18□□□□□ -0.14
Cxcl5P50228 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cxcl5P50228 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.18□□□□□ -0.14
Cxcl5P50228 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.18□□□□□ -0.14
Cxcl5P50228 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Mir1199-201ENSMUST00000117015 119 ntBASIC14.17□□□□□ -0.14
Cxcl5P50228 Gm22240-201ENSMUST00000175225 82 ntBASIC14.17□□□□□ -0.14
Cxcl5P50228 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cxcl5P50228 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.17□□□□□ -0.14
Cxcl5P50228 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cxcl5P50228 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cxcl5P50228 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.17□□□□□ -0.14
Cxcl5P50228 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.16□□□□□ -0.14
Cxcl5P50228 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cxcl5P50228 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.16□□□□□ -0.14
Cxcl5P50228 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Gm12085-201ENSMUST00000119263 940 ntBASIC14.16□□□□□ -0.14
Cxcl5P50228 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl5P50228 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Gm10812-201ENSMUST00000099864 546 ntBASIC14.16□□□□□ -0.14
Cxcl5P50228 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl5P50228 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Cxcl5P50228 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cxcl5P50228 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl5P50228 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms