Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Rfx3P48381 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rfx3P48381 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rfx3P48381 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.7□□□□□ -0.06
Rfx3P48381 Mir7071-201ENSMUST00000184847 69 ntBASIC14.7□□□□□ -0.06
Rfx3P48381 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.7□□□□□ -0.06
Rfx3P48381 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.7□□□□□ -0.06
Rfx3P48381 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rfx3P48381 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Rfx3P48381 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx3P48381 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rfx3P48381 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.69□□□□□ -0.06
Rfx3P48381 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Gm2274-201ENSMUST00000184539 609 ntBASIC14.69□□□□□ -0.06
Rfx3P48381 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfx3P48381 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx3P48381 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.68□□□□□ -0.06
Rfx3P48381 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rfx3P48381 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfx3P48381 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rfx3P48381 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.68□□□□□ -0.06
Rfx3P48381 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.68□□□□□ -0.06
Rfx3P48381 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Rfx3P48381 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.68□□□□□ -0.06
Rfx3P48381 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rfx3P48381 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rfx3P48381 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx3P48381 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.67□□□□□ -0.06
Rfx3P48381 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rfx3P48381 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms