Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.55■□□□□ 0.08
Sox18P43680 Gm11025-201ENSMUST00000140773 466 ntBASIC15.55■□□□□ 0.08
Sox18P43680 CT009738.1-201ENSMUST00000219031 809 ntBASIC15.55■□□□□ 0.08
Sox18P43680 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.55■□□□□ 0.08
Sox18P43680 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox18P43680 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sox18P43680 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.54■□□□□ 0.08
Sox18P43680 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sox18P43680 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.54■□□□□ 0.08
Sox18P43680 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Gm14701-201ENSMUST00000117156 348 ntBASIC15.54■□□□□ 0.08
Sox18P43680 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.54■□□□□ 0.08
Sox18P43680 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox18P43680 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.54■□□□□ 0.08
Sox18P43680 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Sox18P43680 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sox18P43680 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.54■□□□□ 0.08
Sox18P43680 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Sox18P43680 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox18P43680 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox18P43680 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox18P43680 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.54■□□□□ 0.08
Sox18P43680 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox18P43680 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox18P43680 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox18P43680 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.53■□□□□ 0.08
Sox18P43680 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.53■□□□□ 0.08
Sox18P43680 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Sox18P43680 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.53■□□□□ 0.08
Sox18P43680 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox18P43680 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Sox18P43680 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Gm27321-201ENSMUST00000185021 205 ntBASIC15.53■□□□□ 0.08
Sox18P43680 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sox18P43680 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox18P43680 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sox18P43680 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sox18P43680 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sox18P43680 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.52■□□□□ 0.08
Sox18P43680 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sox18P43680 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Gm7222-201ENSMUST00000117512 906 ntBASIC15.52■□□□□ 0.08
Sox18P43680 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.52■□□□□ 0.08
Sox18P43680 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sox18P43680 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox18P43680 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Sox18P43680 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox18P43680 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sox18P43680 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sox18P43680 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sox18P43680 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sox18P43680 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sox18P43680 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox18P43680 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms