Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Timp3P39876 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Timp3P39876 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.31□□□□□ -0.28
Timp3P39876 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Timp3P39876 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Timp3P39876 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.3□□□□□ -0.28
Timp3P39876 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.3□□□□□ -0.28
Timp3P39876 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.3□□□□□ -0.28
Timp3P39876 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Timp3P39876 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.3□□□□□ -0.28
Timp3P39876 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.3□□□□□ -0.28
Timp3P39876 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Timp3P39876 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.3□□□□□ -0.28
Timp3P39876 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Timp3P39876 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Timp3P39876 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Timp3P39876 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Timp3P39876 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Timp3P39876 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Timp3P39876 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Timp3P39876 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.29□□□□□ -0.28
Timp3P39876 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.29□□□□□ -0.28
Timp3P39876 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Gm29707-201ENSMUST00000196325 491 ntBASIC13.29□□□□□ -0.28
Timp3P39876 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Timp3P39876 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Timp3P39876 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Timp3P39876 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Timp3P39876 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.28□□□□□ -0.28
Timp3P39876 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Timp3P39876 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Timp3P39876 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Timp3P39876 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.28□□□□□ -0.28
Timp3P39876 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Timp3P39876 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Timp3P39876 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms