Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Upk2P38575 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Upk2P38575 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Upk2P38575 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.28□□□□□ -0.12
Upk2P38575 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.27□□□□□ -0.12
Upk2P38575 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk2P38575 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Upk2P38575 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk2P38575 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk2P38575 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk2P38575 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk2P38575 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Upk2P38575 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.27□□□□□ -0.13
Upk2P38575 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.27□□□□□ -0.13
Upk2P38575 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.27□□□□□ -0.13
Upk2P38575 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk2P38575 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Upk2P38575 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk2P38575 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Upk2P38575 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.27□□□□□ -0.13
Upk2P38575 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.27□□□□□ -0.13
Upk2P38575 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Upk2P38575 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Upk2P38575 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Upk2P38575 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.26□□□□□ -0.13
Upk2P38575 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Upk2P38575 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Upk2P38575 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.26□□□□□ -0.13
Upk2P38575 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk2P38575 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Upk2P38575 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.26□□□□□ -0.13
Upk2P38575 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Upk2P38575 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.25□□□□□ -0.13
Upk2P38575 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Upk2P38575 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Upk2P38575 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Upk2P38575 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk2P38575 Mir770-201ENSMUST00000103252 94 ntBASIC14.25□□□□□ -0.13
Upk2P38575 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.25□□□□□ -0.13
Upk2P38575 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Upk2P38575 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Upk2P38575 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms