Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.17□□□□□ -0.14
Apoc1P34928 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Apoc1P34928 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Apoc1P34928 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.17□□□□□ -0.14
Apoc1P34928 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Apoc1P34928 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.17□□□□□ -0.14
Apoc1P34928 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.17□□□□□ -0.14
Apoc1P34928 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Apoc1P34928 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.16□□□□□ -0.14
Apoc1P34928 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Apoc1P34928 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Apoc1P34928 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Apoc1P34928 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Apoc1P34928 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.15□□□□□ -0.14
Apoc1P34928 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Gm22240-201ENSMUST00000175225 82 ntBASIC14.15□□□□□ -0.14
Apoc1P34928 Gm21814-202ENSMUST00000203277 873 ntBASIC14.15□□□□□ -0.14
Apoc1P34928 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Apoc1P34928 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Apoc1P34928 Actl10-202ENSMUST00000226583 1501 ntBASIC14.15□□□□□ -0.14
Apoc1P34928 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Apoc1P34928 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Apoc1P34928 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.14□□□□□ -0.15
Apoc1P34928 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Apoc1P34928 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.14□□□□□ -0.15
Apoc1P34928 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.14□□□□□ -0.15
Apoc1P34928 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.14□□□□□ -0.15
Apoc1P34928 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.14□□□□□ -0.15
Apoc1P34928 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Apoc1P34928 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Apoc1P34928 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Apoc1P34928 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Apoc1P34928 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Apoc1P34928 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.13□□□□□ -0.15
Apoc1P34928 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Apoc1P34928 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Apoc1P34928 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.13□□□□□ -0.15
Apoc1P34928 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Apoc1P34928 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Apoc1P34928 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms