Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RxrbP28704 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RxrbP28704 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RxrbP28704 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RxrbP28704 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RxrbP28704 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RxrbP28704 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.33■□□□□ 0.2
RxrbP28704 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.33■□□□□ 0.2
RxrbP28704 Gm9731-201ENSMUST00000209480 747 ntBASIC16.33■□□□□ 0.2
RxrbP28704 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.33■□□□□ 0.2
RxrbP28704 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RxrbP28704 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RxrbP28704 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RxrbP28704 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.32■□□□□ 0.2
RxrbP28704 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RxrbP28704 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.32■□□□□ 0.2
RxrbP28704 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.32■□□□□ 0.2
RxrbP28704 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.32■□□□□ 0.2
RxrbP28704 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RxrbP28704 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RxrbP28704 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RxrbP28704 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RxrbP28704 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RxrbP28704 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.31■□□□□ 0.2
RxrbP28704 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.31■□□□□ 0.2
RxrbP28704 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RxrbP28704 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RxrbP28704 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.31■□□□□ 0.2
RxrbP28704 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Il3ra-202ENSMUST00000223589 738 ntBASIC16.31■□□□□ 0.2
RxrbP28704 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.31■□□□□ 0.2
RxrbP28704 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RxrbP28704 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RxrbP28704 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RxrbP28704 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RxrbP28704 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RxrbP28704 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Gm38027-201ENSMUST00000192315 235 ntBASIC16.3■□□□□ 0.2
RxrbP28704 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RxrbP28704 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms