Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cd48P18181 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.6□□□□□ -0.07
Cd48P18181 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cd48P18181 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.59□□□□□ -0.07
Cd48P18181 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cd48P18181 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.59□□□□□ -0.07
Cd48P18181 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.59□□□□□ -0.07
Cd48P18181 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.59□□□□□ -0.07
Cd48P18181 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cd48P18181 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Cd48P18181 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Cd48P18181 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cd48P18181 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd48P18181 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Cd48P18181 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd48P18181 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd48P18181 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.58□□□□□ -0.07
Cd48P18181 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cd48P18181 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cd48P18181 Actl10-202ENSMUST00000226583 1501 ntBASIC14.58□□□□□ -0.08
Cd48P18181 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cd48P18181 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.58□□□□□ -0.08
Cd48P18181 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cd48P18181 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Cd48P18181 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd48P18181 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cd48P18181 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Cd48P18181 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd48P18181 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Cd48P18181 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.57□□□□□ -0.08
Cd48P18181 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd48P18181 Gm18115-201ENSMUST00000221209 621 ntBASIC14.57□□□□□ -0.08
Cd48P18181 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd48P18181 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd48P18181 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd48P18181 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms