Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Kcna1P16388 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Kcna1P16388 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Kcna1P16388 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.41■□□□□ 0.54
Kcna1P16388 Gm24589-201ENSMUST00000116692 94 ntBASIC18.41■□□□□ 0.54
Kcna1P16388 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.41■□□□□ 0.54
Kcna1P16388 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Birc2-201ENSMUST00000054878 378 ntBASIC18.41■□□□□ 0.54
Kcna1P16388 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.41■□□□□ 0.54
Kcna1P16388 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.41■□□□□ 0.54
Kcna1P16388 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Kcna1P16388 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Kcna1P16388 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Kcna1P16388 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.4■□□□□ 0.54
Kcna1P16388 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.4■□□□□ 0.54
Kcna1P16388 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.4■□□□□ 0.54
Kcna1P16388 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Kcna1P16388 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Kcna1P16388 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Kcna1P16388 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Kcna1P16388 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Kcna1P16388 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Kcna1P16388 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.39■□□□□ 0.54
Kcna1P16388 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Gm15165-201ENSMUST00000118140 502 ntBASIC18.39■□□□□ 0.53
Kcna1P16388 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.39■□□□□ 0.53
Kcna1P16388 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.39■□□□□ 0.53
Kcna1P16388 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Kcna1P16388 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Kcna1P16388 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kcna1P16388 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.38■□□□□ 0.53
Kcna1P16388 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.38■□□□□ 0.53
Kcna1P16388 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.38■□□□□ 0.53
Kcna1P16388 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Kcna1P16388 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.38■□□□□ 0.53
Kcna1P16388 Gm27741-201ENSMUST00000185060 237 ntBASIC18.38■□□□□ 0.53
Kcna1P16388 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.38■□□□□ 0.53
Kcna1P16388 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.38■□□□□ 0.53
Kcna1P16388 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Kcna1P16388 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kcna1P16388 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Kcna1P16388 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.37■□□□□ 0.53
Kcna1P16388 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Kcna1P16388 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kcna1P16388 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.37■□□□□ 0.53
Kcna1P16388 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.37■□□□□ 0.53
Kcna1P16388 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms