Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
ClppO88696 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ClppO88696 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ClppO88696 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ClppO88696 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ClppO88696 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ClppO88696 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ClppO88696 Olfr129-201ENSMUST00000122318 993 ntBASIC15.82■□□□□ 0.12
ClppO88696 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.82■□□□□ 0.12
ClppO88696 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ClppO88696 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Gm29707-201ENSMUST00000196325 491 ntBASIC15.82■□□□□ 0.12
ClppO88696 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.82■□□□□ 0.12
ClppO88696 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.82■□□□□ 0.12
ClppO88696 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ClppO88696 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.82■□□□□ 0.12
ClppO88696 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ClppO88696 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ClppO88696 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ClppO88696 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.81■□□□□ 0.12
ClppO88696 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.81■□□□□ 0.12
ClppO88696 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.81■□□□□ 0.12
ClppO88696 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ClppO88696 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ClppO88696 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ClppO88696 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.81■□□□□ 0.12
ClppO88696 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.8■□□□□ 0.12
ClppO88696 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ClppO88696 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.8■□□□□ 0.12
ClppO88696 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.8■□□□□ 0.12
ClppO88696 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.8■□□□□ 0.12
ClppO88696 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ClppO88696 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ClppO88696 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.8■□□□□ 0.12
ClppO88696 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
ClppO88696 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ClppO88696 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.8■□□□□ 0.12
ClppO88696 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ClppO88696 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ClppO88696 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ClppO88696 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClppO88696 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClppO88696 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
ClppO88696 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClppO88696 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ClppO88696 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms