Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cacna1hO88427 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.78■□□□□ 0.12
Cacna1hO88427 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Cacna1hO88427 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cacna1hO88427 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Cacna1hO88427 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1hO88427 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cacna1hO88427 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Cacna1hO88427 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.77■□□□□ 0.12
Cacna1hO88427 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Mir6420-201ENSMUST00000185032 102 ntBASIC15.77■□□□□ 0.12
Cacna1hO88427 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.77■□□□□ 0.12
Cacna1hO88427 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cacna1hO88427 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.77■□□□□ 0.12
Cacna1hO88427 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cacna1hO88427 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1hO88427 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Cacna1hO88427 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 Gm7787-201ENSMUST00000216858 688 ntBASIC15.77■□□□□ 0.11
Cacna1hO88427 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cacna1hO88427 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cacna1hO88427 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Cacna1hO88427 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.77■□□□□ 0.11
Cacna1hO88427 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1hO88427 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.76■□□□□ 0.11
Cacna1hO88427 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.76■□□□□ 0.11
Cacna1hO88427 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.76■□□□□ 0.11
Cacna1hO88427 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1hO88427 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.75■□□□□ 0.11
Cacna1hO88427 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Gm20553-201ENSMUST00000204205 844 ntBASIC15.75■□□□□ 0.11
Cacna1hO88427 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Cacna1hO88427 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Mir7085-201ENSMUST00000184353 66 ntBASIC15.75■□□□□ 0.11
Cacna1hO88427 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.75■□□□□ 0.11
Cacna1hO88427 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1hO88427 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms