Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.05■□□□□ 0.96
Nid2O88322 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC21.05■□□□□ 0.96
Nid2O88322 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nid2O88322 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Nid2O88322 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Nid2O88322 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.04■□□□□ 0.96
Nid2O88322 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Nid2O88322 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nid2O88322 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Nid2O88322 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.04■□□□□ 0.96
Nid2O88322 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nid2O88322 Gm27321-201ENSMUST00000185021 205 ntBASIC21.04■□□□□ 0.96
Nid2O88322 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nid2O88322 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Nid2O88322 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.03■□□□□ 0.96
Nid2O88322 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.03■□□□□ 0.96
Nid2O88322 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Gm15358-201ENSMUST00000119249 520 ntBASIC21.03■□□□□ 0.96
Nid2O88322 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC21.03■□□□□ 0.96
Nid2O88322 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Gm45612-201ENSMUST00000211320 160 ntBASIC21.03■□□□□ 0.96
Nid2O88322 Gm7787-201ENSMUST00000216858 688 ntBASIC21.03■□□□□ 0.96
Nid2O88322 AC155252.2-201ENSMUST00000226946 680 ntBASIC21.03■□□□□ 0.96
Nid2O88322 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nid2O88322 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Nid2O88322 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nid2O88322 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Nid2O88322 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nid2O88322 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Nid2O88322 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Nid2O88322 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nid2O88322 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Nid2O88322 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nid2O88322 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Nid2O88322 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Nid2O88322 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nid2O88322 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC21.01■□□□□ 0.95
Nid2O88322 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC21.01■□□□□ 0.95
Nid2O88322 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nid2O88322 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nid2O88322 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.01■□□□□ 0.95
Nid2O88322 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nid2O88322 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nid2O88322 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nid2O88322 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nid2O88322 Gm15427-201ENSMUST00000117288 531 ntBASIC21■□□□□ 0.95
Nid2O88322 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC21■□□□□ 0.95
Nid2O88322 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC21■□□□□ 0.95
Nid2O88322 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Gm18489-201ENSMUST00000172565 551 ntBASIC21■□□□□ 0.95
Nid2O88322 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21■□□□□ 0.95
Nid2O88322 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Gm13127-201ENSMUST00000118978 1389 ntBASIC21■□□□□ 0.95
Nid2O88322 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nid2O88322 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nid2O88322 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms