Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.22■□□□□ 0.83
Cfdp1O88271 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.22■□□□□ 0.83
Cfdp1O88271 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cfdp1O88271 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cfdp1O88271 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.21■□□□□ 0.83
Cfdp1O88271 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cfdp1O88271 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cfdp1O88271 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cfdp1O88271 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Cfdp1O88271 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.2■□□□□ 0.82
Cfdp1O88271 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.2■□□□□ 0.82
Cfdp1O88271 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.2■□□□□ 0.82
Cfdp1O88271 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cfdp1O88271 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cfdp1O88271 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.19■□□□□ 0.82
Cfdp1O88271 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Gm7461-201ENSMUST00000058918 827 ntBASIC20.19■□□□□ 0.82
Cfdp1O88271 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cfdp1O88271 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Cfdp1O88271 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.18■□□□□ 0.82
Cfdp1O88271 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.18■□□□□ 0.82
Cfdp1O88271 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfdp1O88271 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cfdp1O88271 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.17■□□□□ 0.82
Cfdp1O88271 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.17■□□□□ 0.82
Cfdp1O88271 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.17■□□□□ 0.82
Cfdp1O88271 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfdp1O88271 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms