Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.47□□□□□ -0.25
SncaO55042 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.47□□□□□ -0.25
SncaO55042 Gm10653-202ENSMUST00000139570 835 ntBASIC13.47□□□□□ -0.25
SncaO55042 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SncaO55042 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.47□□□□□ -0.25
SncaO55042 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.47□□□□□ -0.25
SncaO55042 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SncaO55042 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
SncaO55042 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.47□□□□□ -0.25
SncaO55042 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
SncaO55042 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SncaO55042 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.46□□□□□ -0.25
SncaO55042 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.46□□□□□ -0.25
SncaO55042 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
SncaO55042 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.46□□□□□ -0.25
SncaO55042 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SncaO55042 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.46□□□□□ -0.25
SncaO55042 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.46□□□□□ -0.25
SncaO55042 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SncaO55042 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.46□□□□□ -0.25
SncaO55042 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SncaO55042 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SncaO55042 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
SncaO55042 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SncaO55042 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SncaO55042 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SncaO55042 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SncaO55042 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
SncaO55042 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SncaO55042 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SncaO55042 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.45□□□□□ -0.26
SncaO55042 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SncaO55042 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
SncaO55042 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SncaO55042 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SncaO55042 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SncaO55042 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.44□□□□□ -0.26
SncaO55042 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SncaO55042 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SncaO55042 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.44□□□□□ -0.26
SncaO55042 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SncaO55042 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms