Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Efnb3O35393 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.87□□□□□ -0.35
Efnb3O35393 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.87□□□□□ -0.35
Efnb3O35393 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Efnb3O35393 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Efnb3O35393 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Efnb3O35393 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Efnb3O35393 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.86□□□□□ -0.35
Efnb3O35393 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Efnb3O35393 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.86□□□□□ -0.35
Efnb3O35393 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.86□□□□□ -0.35
Efnb3O35393 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.86□□□□□ -0.35
Efnb3O35393 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Efnb3O35393 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Efnb3O35393 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.86□□□□□ -0.35
Efnb3O35393 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Efnb3O35393 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.85□□□□□ -0.35
Efnb3O35393 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Efnb3O35393 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.85□□□□□ -0.35
Efnb3O35393 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.85□□□□□ -0.35
Efnb3O35393 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Efnb3O35393 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.85□□□□□ -0.35
Efnb3O35393 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Efnb3O35393 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.85□□□□□ -0.35
Efnb3O35393 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Efnb3O35393 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Efnb3O35393 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Efnb3O35393 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Efnb3O35393 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms