Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Gm14859-201ENSMUST00000117752 357 ntBASIC15.27■□□□□ 0.04
Cx3cl1O35188 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Gm21362-201ENSMUST00000194272 928 ntBASIC15.27■□□□□ 0.04
Cx3cl1O35188 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Gm7367-201ENSMUST00000057611 492 ntBASIC15.27■□□□□ 0.04
Cx3cl1O35188 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cx3cl1O35188 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cx3cl1O35188 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.26■□□□□ 0.03
Cx3cl1O35188 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cx3cl1O35188 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.25■□□□□ 0.03
Cx3cl1O35188 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cl1O35188 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.24■□□□□ 0.03
Cx3cl1O35188 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.24■□□□□ 0.03
Cx3cl1O35188 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms