Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.23□□□□□ -0.77
Pkd1O08852 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.23□□□□□ -0.77
Pkd1O08852 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.23□□□□□ -0.77
Pkd1O08852 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pkd1O08852 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pkd1O08852 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pkd1O08852 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pkd1O08852 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.23□□□□□ -0.77
Pkd1O08852 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pkd1O08852 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.23□□□□□ -0.77
Pkd1O08852 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC10.23□□□□□ -0.77
Pkd1O08852 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.23□□□□□ -0.77
Pkd1O08852 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.22□□□□□ -0.77
Pkd1O08852 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Pkd1O08852 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.22□□□□□ -0.77
Pkd1O08852 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Pkd1O08852 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC10.22□□□□□ -0.77
Pkd1O08852 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm25287-201ENSMUST00000103846 110 ntBASIC10.22□□□□□ -0.77
Pkd1O08852 Gm22918-201ENSMUST00000103855 110 ntBASIC10.22□□□□□ -0.77
Pkd1O08852 Gm13823-201ENSMUST00000119930 345 ntBASIC10.22□□□□□ -0.77
Pkd1O08852 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.22□□□□□ -0.77
Pkd1O08852 Gm27306-201ENSMUST00000183970 107 ntBASIC10.22□□□□□ -0.77
Pkd1O08852 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Pkd1O08852 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pkd1O08852 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Gm25857-201ENSMUST00000082788 129 ntBASIC10.21□□□□□ -0.77
Pkd1O08852 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Pkd1O08852 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.21□□□□□ -0.77
Pkd1O08852 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.21□□□□□ -0.77
Pkd1O08852 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.21□□□□□ -0.77
Pkd1O08852 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pkd1O08852 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.21□□□□□ -0.78
Pkd1O08852 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.21□□□□□ -0.78
Pkd1O08852 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.21□□□□□ -0.78
Pkd1O08852 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.21□□□□□ -0.78
Pkd1O08852 Rpph1-201ENSMUST00000175096 319 ntBASIC10.21□□□□□ -0.78
Pkd1O08852 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Pkd1O08852 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pkd1O08852 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.2□□□□□ -0.78
Pkd1O08852 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pkd1O08852 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Mir449b-201ENSMUST00000104833 80 ntBASIC10.2□□□□□ -0.78
Pkd1O08852 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.2□□□□□ -0.78
Pkd1O08852 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms