Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trove2O08848 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trove2O08848 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Trove2O08848 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Mir1199-201ENSMUST00000117015 119 ntBASIC16.7■□□□□ 0.26
Trove2O08848 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trove2O08848 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.7■□□□□ 0.26
Trove2O08848 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trove2O08848 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Trove2O08848 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trove2O08848 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.69■□□□□ 0.26
Trove2O08848 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Trove2O08848 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trove2O08848 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.69■□□□□ 0.26
Trove2O08848 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Gm10812-201ENSMUST00000099864 546 ntBASIC16.69■□□□□ 0.26
Trove2O08848 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trove2O08848 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trove2O08848 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Trove2O08848 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trove2O08848 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.68■□□□□ 0.26
Trove2O08848 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.68■□□□□ 0.26
Trove2O08848 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.68■□□□□ 0.26
Trove2O08848 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Trove2O08848 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trove2O08848 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trove2O08848 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Trove2O08848 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.67■□□□□ 0.26
Trove2O08848 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms