Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.34□□□□□ -0.59
Gm10542F6XDR3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.34□□□□□ -0.59
Gm10542F6XDR3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10542F6XDR3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gm10542F6XDR3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Gm10542F6XDR3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Gm12085-201ENSMUST00000119263 940 ntBASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gm10542F6XDR3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Gm18958-201ENSMUST00000174258 762 ntBASIC11.32□□□□□ -0.6
Gm10542F6XDR3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Gm18666-201ENSMUST00000190039 958 ntBASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm10542F6XDR3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10542F6XDR3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms