Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm8879F6R3J9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Actl10-202ENSMUST00000226583 1501 ntBASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Gm20760-201ENSMUST00000179197 648 ntBASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.54■□□□□ 0.08
Gm8879F6R3J9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm8879F6R3J9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.52■□□□□ 0.08
Gm8879F6R3J9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gm8879F6R3J9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm8879F6R3J9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms