Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc85cE9Q6B2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.98■□□□□ 0.79
Ccdc85cE9Q6B2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.97■□□□□ 0.79
Ccdc85cE9Q6B2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Gm20553-201ENSMUST00000204205 844 ntBASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc85cE9Q6B2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc85cE9Q6B2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc85cE9Q6B2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms