Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Gm44503E9PYU5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm44503E9PYU5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Gm25406-201ENSMUST00000157599 105 ntBASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm44503E9PYU5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Gm23935-201ENSMUST00000102303 57 ntBASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Gm24270-201ENSMUST00000102326 57 ntBASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Gm7222-201ENSMUST00000117512 906 ntBASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Gm24245-201ENSMUST00000157318 57 ntBASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gm44503E9PYU5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm44503E9PYU5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Gm4995-201ENSMUST00000117247 432 ntBASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm44503E9PYU5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm44503E9PYU5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms