Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh17E9PXF0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh17E9PXF0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh17E9PXF0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.08■□□□□ 0.01
Pcdh17E9PXF0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh17E9PXF0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh17E9PXF0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.07■□□□□ 0
Pcdh17E9PXF0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh17E9PXF0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.06■□□□□ 0
Pcdh17E9PXF0 Gm11452-201ENSMUST00000122376 690 ntBASIC15.06■□□□□ 0
Pcdh17E9PXF0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.06■□□□□ 0
Pcdh17E9PXF0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh17E9PXF0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms